BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004F05SP1|AL425274
(832 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1680 1566 0.0
>3x_Contig1680
Length = 12597
Score = 1566 bits (781), Expect = 0.0
Identities = 812/832 (97%)
Strand = Plus / Plus
Query: 1 atcgtgaaccagataccgccaaactggctatgcgatacatactttttctctcccattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 atcgtgaaccagataccgccaaactggctatgcgatacatactttttctctcccattcag 4639
Query: 61 cttttccagtctcgcccatactcacatgcgaatscttgaccaatgaacttgaatctagtc 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4640 cttttccagtctcgcccatactcacatgcgaatccttgaccaatgaacttgaatctagtc 4699
Query: 121 caatggtacgcccatcctaatagatctatatactatgtaaagtatcaagctaatcgaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 caatggtacgcccatcctaatagatctatatactatgtaaagtatcaagctaatcgaagt 4759
Query: 181 tctgtcatcattacagctgctttccacactgtgaatttctcttgttcgttttcctttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4760 tctgtcatcattacagctgctttccacactgtgaatttctcttgttcgttttcctttttt 4819
Query: 241 tttcctttcgactgtgaaaaaactcgtagaaaaatcaagccagaggtatatgcttcgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4820 tttcctttcgactgtgaaaaaactcgtagaaaaatcaagccagaggtatatgcttcgagg 4879
Query: 301 acgaaaattttgtatataagtraaaacagaatattcaacgactttttcacaagttagact 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4880 acgaaaattttgtatataagtaaaaacagaatattcaacgactttttcacaagttagact 4939
Query: 361 ggagatataatgtgcatgtgcatatatatttrtggtttacacgttcaagtttgtaataat 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 4940 ggagatataatgtgcatgtgcatatatatttatggtttacacgttcaagtttgtaataat 4999
Query: 421 tgtgtatatktkatgctataattatttatatatatagrggggkrcatttatatttgtaca 480
||||||||| | |||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 5000 tgtgtatattttatgctataattatttatatatatatatttgtacatttatatttgtaca 5059
Query: 481 tcattctcccaaggrtctttttcgtagattatcttgtttgttaagaggtgtgttcatttt 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5060 tcattctcccaaggatctttttcgtagattatcttgtttgttaagaggtgtgttcatttt 5119
Query: 541 gacttggaactgcaagcgcaaatactctaatattcgtktctaacatacacaatgggnaac 600
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 5120 gacttggaactgcaagcgcaaatactctaatattcgtttctaacatacacaatgggtaac 5179
Query: 601 aacaacacttttttgtttacttctgaatctgttggtgaaggtcacccagataagakctgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5180 aacaacacttttttgtttacttctgaatctgttggtgaaggtcacccagataagatctgt 5239
Query: 661 gakcaagtttccgatgctattttggacgcttgtgtgagagaagakccattgtctaaggtt 720
|| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 5240 gatcaagtttccgatgctattttggacgcttgtttgagagaagatccattgtctaaggtt 5299
Query: 721 gcatgtgaaactgcagccaagactggtatgatcatggttttcggtgaaatcaccaccaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5300 gcatgtgaaactgcagccaagactggtatgatcatggttttcggtgaaatcaccaccaga 5359
Query: 781 gccaacctkgactaccaaaagattgtccgtgacaccatcaagcaaattggtt 832
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5360 gccaacctggactaccaaaagattgtccgtgacaccatcaagcaaattggtt 5411
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6484
Number of Sequences: 1807
Number of extensions: 6484
Number of successful extensions: 236
Number of sequences better than 1.0e-20: 1
length of query: 832
length of database: 10,358,551
effective HSP length: 16
effective length of query: 816
effective length of database: 10,329,639
effective search space: 8428985424
effective search space used: 8428985424
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)